| QTL Map Information |
|---|
| Chromosome: | 17 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
42.1-42.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs43472856 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 4.12E-4 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Chinese Holstein cattle. |
| Breeds associated:
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| Design: | Cattle were genotyped using the Genomic Profiler Bovine 100K chip containing 88,107 SNPs, and GWAS were performed for reproductive traits. A total of 76,160 SNPs were used for GWAS. |
| Analysis: | A mixed linear model was used. |
| Software: | PLINK v1.9, GEMMA v0.98.5, R v3.5.1 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Liu J, Xu L, Ding X, Ma Y |
| Affiliation: | Tianjin Key Laboratory of Animal Molecular Breeding and Biotechnology, Tianjin Engineering Research Center of Animal Healthy Farming, Institute of Animal Science and Veterinary, Tianjin Academy of Agricultural Sciences, Tianjin 300381, China |
| Title: | Genome-Wide Association Analysis of Reproductive Traits in Chinese Holstein Cattle |
| Journal: | Genes, 2023, 15(1):12 |
| Links: |
PubMed | Abstract | List all data
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