| QTL Map Information |
|---|
| Chromosome: | 13 |
| QTL Peak Location: | 85.61 (cM) |
| QTL Span: | 85.69-85.72 (cM)
71.1-71.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs109910368 |
| Peak: | |
| Lower, "Significant": | rs137562332 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
F_Stat | 23.28 | | P_values | 1.6E-6 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
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|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein-Friesian cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for bovine tuberculosis incidence. A total of 617,010 SNPs were used for association analysis. |
| Analysis: | The genome-wide rapid association using mixed model and regression approach was used. |
| Software: | GenABEL in R, Haploview, ASReml |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Bermingham ML, Bishop SC, Woolliams JA, Pong-Wong R, Allen AR, McBride SH, Ryder JJ, Wright DM, Skuce RA, McDowell SWJ, Glass EJ |
| Affiliation: | The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Edinburgh, UK |
| Title: | Genome-wide association study identifies novel loci associated with resistance to bovine tuberculosis |
| Journal: | Heredity, 2014, 112(5): 543-51 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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