| QTL Map Information |
|---|
| Chromosome: | 11 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
0.2-0.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs42712296 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 6.93E-6 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | ZC3H6 (zinc finger CCCH-type containing 6) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Simmental x Holstein cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the GGP Bovine 100K BeadChip, and GWAS were performed for coat color and birth weight. A total of 83,723 SNPs were used for analysis. |
| Analysis: | Single-SNP GWAS was performed using a linear mixed model. |
| Software: | GEMMA v0.98.5, PLINK v1.9, Beagle v3.3.2 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Wang J, Fan T, Du Z, Xu L, Chen Y, Zhang L, Gao H, Li J, Ma Y, Gao X |
| Affiliation: | Laboratory of Molecular Biology and Bovine Breeding, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing 100193, China |
| Title: | Genome-Wide Association Analysis Identifies the PMEL Gene Affecting Coat Color and Birth Weight in Simmental × Holstein |
| Journal: | Animals : an open access journal from MDPI, 2023, 13(24):3821 |
| Links: |
PubMed | Abstract | List all data
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