| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
69.3-69.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs41595477 |
| Peak: | rs41595477 |
| Lower, "Significant": | rs109669664 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Bonsmara cattle. |
| Breeds associated:
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| Design: | Animals were genotyped with one of five arrays (GeneSeek Genomic Profiler (GGP) 150K, GGP 80K, Versa 50K, SASB 50K, or ICBF IDB v.2), and association analyses were performed for reproductive traits. |
| Analysis: | Linear mixed models were used. |
| Software: | GCTA v1.94, WOMBAT, qqman in R, PLINK v.1.9 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Reding JJ, van der Westhuizen RR, Berry DP, van Marle-Köster E |
| Affiliation: | Department of Animal Sciences, University of Pretoria, Hatfield, 0028, South Africa |
| Title: | Understanding the underlying genetic mechanisms for age at first calving, inter-calving period and scrotal circumference in Bonsmara cattle |
| Journal: | BMC Genomics, 2023, 24(1): 480 |
| Links: |
PubMed | Abstract | List all data
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