| QTL Map Information |
|---|
| Chromosome: | 5 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
45.6-45.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs110853455 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 0.0408 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | IFNG (interferon gamma) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #256211
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Sahiwal, Gir, Tharparkar, Kankrej, and Frieswal cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped for a total of 10 SNPs in the IFNG, SLC11A1, ANKRA2, and PGLYRP1 genes, and association analysis was performed for susceptibility to MAP infection. |
| Analysis: | Univariate logistic regression analysis was performed. |
| Software: | SAS 9.3 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Gopi B, Vir Singh R, Kumar S, Kumar S, Chauhan A, Sonwane A, Kumar A, Bharati J, Vir Singh S |
| Affiliation: | Division of Animal Genetics, ICAR- Indian Veterinary Research Institute, Izatnagar, 243122, Bareilly, UP, India |
| Title: | Effect of selected single nucleotide polymorphisms in SLC11A1, ANKRA2, IFNG and PGLYRP1 genes on host susceptibility to Mycobacterium avium subspecies paratuberculosis infection in Indian cattle |
| Journal: | Veterinary research communications, 2022, 46(1): 209-221 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #34718924
Add your comments
Note similar findings
Note contradictions
|
