| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 63.3 (cM) |
| QTL Span: | 30.22-30.42 (cM)
26.5-26.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
F_Stat | 5.18 | | P_values | 0.0231 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | UGDH (UDP-glucose 6-dehydrogenase) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #25191
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Chinese Holstein cows. |
| Breeds associated:
|
| Design: | Animals were genotyped for 64 SNPs in a QTL region on BTA6 and analyzed for milk production traits. UGDH was determined to be the most plausible candidate gene (10 SNPs used for association analysis). |
| Analysis: | The MIXED procedure was used. |
| Software: | SAS, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Xu Q, Mei G, Sun D, Zhang Q, Zhang Y, Yin C, Chen H, Ding X, Liu J |
| Affiliation: | Department of Animal Genetics and Breeding, College of Animal Science and Technology, Key Laboratory of Animal Genetics and Breeding of Ministry of Agriculture, National Engineering Laboratory for Animal Breeding, China Agricultural |
| Title: | Detection of genetic association and functional polymorphisms of UGDH affecting milk production trait in Chinese Holstein cattle |
| Journal: | BMC genomics, 2012, 13: 590 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #23122059
Add your comments
Note similar findings
Note contradictions
|
