Release 56
(Apr 24, 2025)

QTL 238175 Description:

 Trait Information
Trait name: Somatic cell count Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: lnSCC Product Trait Ontology: Milk somatic cell count
Symbol: SCC Clinical Measurement Ontology: Milk somatic cell count
 QTL Map Information
Chromosome:11
QTL Peak Location:n/a
QTL Span:n/a
Upper, "Suggestive":n/a
Upper, "Significant":rs110180463
Peak:
Lower, "Significant":rs109625649
Lower, "Suggestive":n/a
Marker type:Haplotype
Analysis type:QTL
Model tested:n/a
Test base:n/a
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:PAEP (progestagen-associated endometrial protein)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #238175
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Cattle were from three Polish Black and White Holstein-Friesian dairy herds.
     Breeds associated:
    Design:Animals were genotyped for SNPs in the PAEP gene and analyzed for milk quality and composition traits.
    Analysis:One-way ANOVA was used, followed by a Bonferroni correction.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Kolenda M, Sitkowska B, Kamola D, Lambert BD
    Affiliation:Department of Animal Biotechnology and Genetics, Faculty of Animal Breeding and Biology, UTP University of Science and Technology, Bydgoszcz 85-084, Poland
    Title:Composite genotypes of progestogen-associated endometrial protein gene and their association with composition and quality of dairy cattle milk
    Journal:Animal bioscience, 2021, 34(8): 1283-1289
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:Herd C
    User inputs on reference #33677915
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL238175 was published in 2021, and was curated into QTLdb on 2021-10-08. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:238175

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team