| QTL Map Information |
|---|
| Chromosome: | 29 |
| QTL Peak Location: | 62.79 (cM) |
| QTL Span: | 62.79-62.79 (cM)
43.4-43.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs17872050 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 0.0006 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | CAPN1 (calpain 1, (mu/I) large subunit) |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #23259
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were of varying breed composition (Herferd, Angus, Red Poll, Pinzgauer, Beefmaster, Brangus, Bonsmara, Romosinuano). |
| Breeds associated:
n/a
|
| Design: | Animals were genotyped for one SNP each in CAST and CAPN and analyzed for beef iron content. |
| Analysis: | A mixed model was used. |
| Software: | SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Casas E, Duan Q, Schneider M J, Shackelford S D, Wheeler T L, Cundiff L V, Reecy J M |
| Affiliation: | National Animal Disease Center, USDA, ARS, Ames, IA, 50010, USA. |
| Title: | Polymorphisms in calpastatin and mu-calpain genes are associated with beef iron content. |
| Journal: | Animal genetics, 2014, 45(2):283-4 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Total iron |
User inputs on reference #24303986
Add your comments
Note similar findings
Note contradictions
|
