| QTL Map Information |
|---|
| Chromosome: | 5 |
| QTL Peak Location: | 129.84 (cM) |
| QTL Span: | 129.84-129.84 (cM)
112.3-112.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs109059438 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.001 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | LOC784935 (histone acetyltransferase p300-like) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein bulls. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip and analyzed for sire conception rate. A total of 38650 markers were available for analysis. |
| Analysis: | Two different models were used: a mixed linear model with SNP genotype treated as a linear covariate, and a mixed linear model with SNP genotype treated as a categorical variable. |
| Software: | R software |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Peņagaricano F, Weigel K A, Khatib H |
| Affiliation: | Department of Animal Sciences, University of Wisconsin-Madison, 1675 Observatory Drive, Madison, WI 53706, USA. |
| Title: | Genome-wide association study identifies candidate markers for bull fertility in Holstein dairy cattle. |
| Journal: | Animal genetics, 2012, 43 Suppl 1: 65-71 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | SNP genotype as linear covariate |
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