Release 56
(Apr 24, 2025)

QTL 224085 Description:

 Trait Information
Trait name: Subcutaneous fat thickness Vertebrate Trait Ontology: Subcutaneous adipose thickness
Reported name: carcass fatness Product Trait Ontology: n/a
Symbol: SUBFAT Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:2
QTL Peak Location:n/a
QTL Span:n/a
55.7-56.0 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:QTL
Model tested:n/a
Test base:n/a
Threshold significance level:Significant
VARIANCE0.52%
Dominance effect:n/a
Additive effect:n/a
Associated Gene:n/a
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #224085
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Nellore cattle.
     Breeds associated:
    Design:Animals were genotyped using the GGP-Indicus SNP panel and GWAS was performed for ultrasound fat thickness. A total of 33,623 SNPs were used for analysis.
    Analysis:GWAS was performed using single-step genomic best linear unbiased prediction methodology.
    Software:BLUPF90
    Notes: 
    Links:Edit

     Reference
    Authors:Martins R, Brito L F, Machado P C, Pinto L F B, Silva M R, Schenkel F S, Pedrosa V B
    Affiliation:Department of Animal Sciences, State University of Ponta Grossa, Ponta Grossa, PR, 84030-900, Brazil
    Title:Genome-wide association study and pathway analysis for carcass fatness in Nellore cattle measured by ultrasound
    Journal:Animal genetics, 2021, 52(5):730-733
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #34370325
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL224085 was published in 2021, and was curated into QTLdb on 2021-08-18. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:224085

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team