| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | 21.46 (cM) |
| QTL Span: | 21.46-21.46 (cM)
16.6-16.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs208814257 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | CD209 (CD209 molecule) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Sahiwal, Tharparkar, Holstein Friesian, and Vrindavani crossbred cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped for 4 SNPs in the CD209 gene and analyzed for bovine paratuberculosis susceptibility. |
| Analysis: | Univariate analysis was performed for categorical variables with a Chi-square test on the distribution of allele and genotype frequencies between the case and control populations |
| Software: | SAS 9.3 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Kumar S, Kumar S, Singh RV, Chauhan A, Kumar A, Bharati J, Singh SV |
| Affiliation: | Department of Biotechnology, GLA university, Mathura, India |
| Title: | Association of genetic variability in CD209 gene with bovine paratuberculosis disease: a case-control study in the Indian cattle population |
| Journal: | Animal biotechnology, 2022, 33(4):664-671 |
| Links: |
PubMed | Abstract | List all data
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