| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | 4.58 (cM) |
| QTL Span: | 4.58-4.58 (cM)
5.1-5.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs29012920 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | PROC (protein C, inactivator of coagulation factors Va and VIIIa) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were purebred Charolais and Limousin beef cows. |
| Breeds associated:
|
| Design: | Animals were genotyped using the custom International Dairy and Beef SNP chip and analyzed for six production traits. A total of 15,144 SNPs and 15,137 SNPs were used for analysis in Limousin and Charolais cows, respectively. |
| Analysis: | Single-SNP GWAS were carried out for each breed separately using a linear mixed model. A meta-analysis was conducted across the two breeds using a weighted Z-score method. |
| Software: | GCTA, METAL |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Keogh K, Carthy T R, McClure M C, Waters S M, Kenny D A |
| Affiliation: | Animal and Bioscience Research Department, Animal and Grassland Research and Innovation Centre, Teagasc Grange, Dunsany, Co. Meath C15 PW93, Ireland |
| Title: | Genome-wide association study of economically important traits in Charolais and Limousin beef cows |
| Journal: | Animal : an international journal of animal bioscience, 2021, 15(1): 100011 |
| Links: |
PubMed | Abstract | List all data
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