| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | 118.60 (cM) |
| QTL Span: | 118.60-118.60 (cM)
96.0-96.0 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs110540286 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 4.37E-6 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | CAST (calpastatin) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were German Brown Swiss calves. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineSNP50 v2 BeadChip and analyzed for calf perinatal sucking reflex. Data were imputed to HD, and a total of 525,949 SNPs were used for analysis. |
| Analysis: | GWAS were conducted using both a single-marker and a Bayesian approach. |
| Software: | ASReml, PLINK v1.07, Beagle v 3.3.2, Minimac3 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Dreher C, Wellmann R, Stratz P, Schmid M, Preuß S, Hamann H, Bennewitz J |
| Affiliation: | Institute of Animal Science, University of Hohenheim, 70599 Stuttgart, Germany |
| Title: | Genomic analysis of perinatal sucking reflex in German Brown Swiss calves |
| Journal: | Journal of dairy science, 2019, 102(7): 6296-6305 |
| Links: |
PubMed | Abstract | List all data
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