| QTL Map Information |
|---|
| Chromosome: | 19 |
| QTL Peak Location: | 52.15 (cM) |
| QTL Span: | 52.15-52.15 (cM)
28.3-28.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs136174573 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 7.09E-12 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | PIK3R6 (phosphoinositide-3-kinase regulatory subunit 6) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Guernsey dairy cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using several different chips, with data imputed to HD genotypes, and analyzed for 27 different traits, including milk production, conformation, and productivity traits. The number of SNPs used for analysis ranged from 574,262 to 579,581 for different traits. |
| Analysis: | Single-trait GWAS were carried out using a mixed-model approach. Further conditional analyses were performed to identify significant SNPs in major QTL detected on BTA19. |
| Software: | MMAP |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Li B, VanRaden P M, Null D J, O'Connell J R, Cole J B |
| Affiliation: | Animal Genomics and Improvement Laboratory, Henry A. Wallace Beltsville Agricultural Research Center, USDA Agricultural Research Service, Beltsville, MD 20705-2350 |
| Title: | Major quantitative trait loci influencing milk production and conformation traits in Guernsey dairy cattle detected on BTA19 |
| Journal: | Journal of dairy science, 2020, S0022-0302(20)30949-8 |
| Links: |
PubMed | Abstract | List all data
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