| QTL Map Information |
|---|
| Chromosome: | 7 |
| QTL Peak Location: | 7.81 (cM) |
| QTL Span: | 7.81-7.81 (cM)
6.6-6.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs385556234 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 9.94E-6 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | EPS15L1 (epidermal growth factor receptor pathway substrate 15 like 1) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Hanwoo cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina 50K BeadChip, with data imputed to whole-genome level, and analyzed for carcass quality traits. The final dataset included 10,723,697 SNPs. |
| Analysis: | A univariate linear mixed model was used for GWAS. |
| Software: | Eagle v2.4.1, Minimac3, PLINK v1.90b4, ASReml, GCTA v1.26.0 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | de Las Heras-Saldana S, Lopez BI, Moghaddar N, Park W, Park JE, Chung KY, Lim D, Lee SH, Shin D, van der Werf JHJ |
| Affiliation: | School of Environmental and Rural Science, University of New England, Armidale, NSW 2351, Australia |
| Title: | Use of gene expression and whole-genome sequence information to improve the accuracy of genomic prediction for carcass traits in Hanwoo cattle |
| Journal: | Genetics, Selection, Evolution : GSE, 2020, 52(1): 54 |
| Links: |
PubMed | Abstract | List all data
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