| QTL Map Information |
|---|
| Chromosome: | 26 |
| QTL Peak Location: | 34.95 (cM) |
| QTL Span: | 34.95-34.95 (cM)
24.1-24.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs42092404 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.01 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were German Black Pied cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineSNP50 v3 BeadChip and analyzed for clinical mastitis. A total of 38,224 SNPs were used for analysis. |
| Analysis: | A univariate linear mixed model was used for GWAS. |
| Software: | R software, GEMMA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Meier S, Arends D, Korkuć P, Neumann GB, Brockmann GA |
| Affiliation: | Albrecht Daniel Thaer-Institute for Agricultural and Horticultural Sciences, Animal Breeding Biology and Molecular Genetics, Humboldt-Universität zu Berlin, Invalidenstrasse 42, 10115 Berlin, Germany |
| Title: | A genome-wide association study for clinical mastitis in the dual-purpose German Black Pied cattle breed |
| Journal: | Journal of dairy science, 2020, 103(11): 10289-10298 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Lactation 2, early phase |
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