| QTL Map Information |
|---|
| Chromosome: | 28 |
| QTL Peak Location: | 1.64 (cM) |
| QTL Span: | 1.64-1.64 (cM)
1.2-1.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs109743925 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 3.14E-6 | | FDR | <0.10 | | Dominance effect: | -18.16 |
| Additive effect: | -23.33 |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
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| Animals: | Animals were Danish Holstein cattle. |
| Breeds associated:
|
| Design: | Cows and heifers were genotyped using the Illumina BovineSNP50 BeadChip v1 or v2 and analyzed for fertility traits. A total of 35,391 SNPs were used for analysis. |
| Analysis: | Chi-squared tests were used to test for additive and dominance effects. |
| Software: | PLINK, DMU |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Mao X, Sahana G, Johansson AM, Liu A, Ismael A, Løvendahl P, De Koning DJ, Guldbrandtsen B |
| Affiliation: | Key Laboratory of Vertebrate Evolution and Human Origins, Institute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy of Sciences, Beijing, 100044, China |
| Title: | Genome-wide association mapping for dominance effects in female fertility using real and simulated data from Danish Holstein cattle. |
| Journal: | Sci Rep, 2020, 10(1):2953 |
| Links: |
PubMed | Abstract | List all data
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| Additional Information |
|---|
| Comments: | heifers |
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