| QTL Map Information |
|---|
| Chromosome: | 11 |
| QTL Peak Location: | 25.24 (cM) |
| QTL Span: | 25.24-25.24 (cM)
21.1-21.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs41592172 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 8.33E-7 | | FDR | <0.10 | | Dominance effect: | -9.66 |
| Additive effect: | 13.23 |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #211962
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Danish Holstein cattle. |
| Breeds associated:
|
| Design: | Cows and heifers were genotyped using the Illumina BovineSNP50 BeadChip v1 or v2 and analyzed for fertility traits. A total of 35,391 SNPs were used for analysis. |
| Analysis: | Chi-squared tests were used to test for additive and dominance effects. |
| Software: | PLINK, DMU |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Mao X, Sahana G, Johansson AM, Liu A, Ismael A, Løvendahl P, De Koning DJ, Guldbrandtsen B |
| Affiliation: | Key Laboratory of Vertebrate Evolution and Human Origins, Institute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy of Sciences, Beijing, 100044, China |
| Title: | Genome-wide association mapping for dominance effects in female fertility using real and simulated data from Danish Holstein cattle. |
| Journal: | Sci Rep, 2020, 10(1):2953 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | heifers |
User inputs on reference #32076041
Add your comments
Note similar findings
Note contradictions
|
