Release 56
(Apr 24, 2025)

QTL 21194 Description:

 Trait Information
Trait name: Somatic cell count Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: Somatic Cell Count Product Trait Ontology: Milk somatic cell count
Symbol: SCC Clinical Measurement Ontology: Milk somatic cell count
 QTL Map Information
Chromosome:6
QTL Peak Location:91.8 (cM)
QTL Span:50.89-51.09 (cM)
44.6-44.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:n/a
Test base:n/a
Threshold significance level:n/a
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:CSN3 (casein kappa)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Fleckvieh cattle.
     Breeds associated:
    Design:Animals were genotyped for SNPs in CSN3 and BCO2 and analyzed for milk traits.
    Analysis:The general linear model procedure was used.
    Software:SAS, R software
    Notes: 
    Links:Edit

     Reference
    Authors:Bartonova P, Vrtkova I, Kaplanova K, Urban T
    Affiliation:Department of Animal Morphology, Physiology and Genetics, Mendel University, Brno, Czech Republic.
    Title:Association between CSN3 and BCO2 gene polymorphisms and milk performance traits in the Czech Fleckvieh cattle breed.
    Journal:Genetics and molecular research : GMR, 2012, 11 (2): 1058-63
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #22614274
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  • Cite this Data:

    Animal QTLdb: QTL21194 was published in 2012, and was curated into QTLdb on 2013-06-04. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:21194

     

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