Release 56
(Apr 24, 2025)

QTL 21192 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: Somatic cell score Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:19
QTL Peak Location:68 (cM)
QTL Span:68.50-68.70 (cM)
39.7-39.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:BRCA1 (breast cancer 1, early onset)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Holstein, Sanhe, and Simmental cows.
     Breeds associated:
    Design:Animals were genotyped for three SNPs in BRCA1 and analyzed for mastitis traits.
    Analysis:The general linear model procedure was used.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Yuan Z, Li J, Li J, Zhang L, Gao X, Gao HJ, Xu S
    Affiliation:Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing 100193, People's Republic of China.
    Title:Investigation on BRCA1 SNPs and its effects on mastitis in Chinese commercial cattle.
    Journal:Gene, 2012, 505 (1): 190-4
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:c.46126G>T
    User inputs on reference #22583824
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  • Cite this Data:

    Animal QTLdb: QTL21192 was published in 2012, and was curated into QTLdb on 2013-06-04. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:21192

     

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