| QTL Map Information |
|---|
| Chromosome: | 14 |
| QTL Peak Location: | 30.00 (cM) |
| QTL Span: | 30.00-30.00 (cM)
22.3-22.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs439817527 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Suggestive |
 |
P_values | <0.10 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | RP1 (RP1 axonemal microtubule associated) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #211601
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Nellore cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using a GGP Bos Indicus HD array and analyzed for heifer pregnancy and antral follicle number. A total of 64,800 SNPs were used for analysis. |
| Analysis: | Sires heterozygous for predetermined QTL were identified based on significance of the contrasts between the effects of every two paternally inherited haplotype alleles. Whole-genome sequence data were used to identify sequence variants concordant with the haplotype contrasts.
|
| Software: | FImpute, Gensel |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Oliveira GA Jr., Santos DJA, Cesar ASM, Boison SA, Ventura RV, Perez BC, Garcia JF, Ferraz JBS, Garrick DJ |
| Affiliation: | 8School of Agriculture, Massey University, Ruakura Ag Centre, Hamilton, New Zealand |
| Title: | Fine mapping of genomic regions associated with female fertility in Nellore beef cattle based on sequence variants from segregating sires |
| Journal: | Journal of animal science and biotechnology, 2020, 10: 97 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #31890201
Add your comments
Note similar findings
Note contradictions
|
