| QTL Map Information |
|---|
| Chromosome: | 28 |
| QTL Peak Location: | 19.39 (cM) |
| QTL Span: | 19.39-19.39 (cM)
13.2-13.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs41648899 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
Bayes_value | >10 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were at least 75% Holstein-Friesian. |
| Breeds associated:
|
| Design: | Animals were genotyped for 37869 SNPs and analyzed for MAP-specific antibody response in milk. |
| Analysis: | Multiple SNP analysis was performed using a Markov chain Monte Carlo method using Gibbs sampling to obtain posterior estimates for all the effects in the model. |
| Software: | ASREML |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | van Hulzen K J E, Schopen G C B, van Arendonk J A M, Nielen M, Koets A P, Schrooten C, Heuven H C M |
| Affiliation: | Department of Farm Animal Health, Utrecht University, Utrecht, the Netherlands. |
| Title: | Genome-wide association study to identify chromosomal regions associated with antibody response to Mycobacterium avium subspecies paratuberculosis in milk of Dutch Holstein-Friesians. |
| Journal: | Journal of dairy science, 2012, 95 (5): 2740-8 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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