Release 56
(Apr 24, 2025)

QTL 20642 Description:

 Trait Information
Trait name: Muscle iron content Vertebrate Trait Ontology: Muscle iron amount
Reported name: Iron content Product Trait Ontology: n/a
Symbol: IRON Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:2
QTL Peak Location:6.36 (cM)
QTL Span:6.36-6.36 (cM)
6.8-6.8 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs136600836
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:Experiment-wise
Threshold significance level:Suggestive
P_values<0.10
Dominance effect:n/a
Additive effect:n/a
Associated Gene:SLC40A1 (solute carrier family 40 (iron-regulated transporter), member 1)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were American Angus-sired cattle.
     Breeds associated:
    Design:Animals were genotyped for ten SNPs in TFR2 and nine SNPs in SLC40A1 and analyzed for beef iron content.
    Analysis:A mixed linear model was used.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Duan Q, Tait R G, Mayes M S, Garrick D J, Liu Q, Van Eenennaam A L, Mateescu R G, Van Overbeke D L, Garmyn A J, Beitz D C, Reecy J M,
    Affiliation:Department of Biochemistry, Biophysics and Molecular Biology, Iowa State University, Ames, IA 50011, USA.
    Title:Genetic polymorphisms in bovine transferrin receptor 2 (TFR2) and solute carrier family 40 (iron-regulated transporter), member 1 (SLC40A1) genes and their association with beef iron content.
    Journal:Animal genetics, 2012, 43 (2): 115-22
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #22404347
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  • Cite this Data:

    Animal QTLdb: QTL20642 was published in 2012, and was curated into QTLdb on 2013-04-29. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:20642

     

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