| QTL Map Information |
|---|
| Chromosome: | 22 |
| QTL Peak Location: | 91.66 (cM) |
| QTL Span: | 91.66-91.66 (cM)
57.9-57.9 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs42286978 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Chromosome-wise |
| Threshold significance level: | Significant |
 |
P_values | 5.67E-6 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
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|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein-Friesian dairy cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped for 54001 SNPs using the Illumina BovineSNP50 BeadChip and analyzed for tuberculosis susceptibility. For final analysis, 44426 SNPs were used. |
| Analysis: | A linear model was used. |
| Software: | ASREML, R software, GenABEL |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Finlay EK, Berry DP, Wickham B, Gormley EP, Bradley DG |
| Affiliation: | Department of Genetics, Smurfit Institute, Trinity College Dublin, Dublin, Ireland. |
| Title: | A genome wide association scan of bovine tuberculosis susceptibility in Holstein-Friesian dairy cattle. |
| Journal: | PloS one, 2012, 7(2): e30545 |
| Links: |
PubMed | Abstract | List all data
| Edit |
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