Release 56
(Apr 24, 2025)

QTL 20609 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: Somatic cell score Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:17
QTL Peak Location:5.2 (cM)
QTL Span:5.12-5.41 (cM)
3.9-4.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:TLR2 (toll-like receptor 2)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Xinjiang Brown cattle.
     Breeds associated:
    Design:Animals were genotyped for 15 SNPs in TLR2 and analyzed for SCS.
    Analysis:The general linear model procedure was used.
    Software:SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Bai J, Lin J, Li W, Liu M
    Affiliation:College of Life Science and Technology, Xinjiang, China.
    Title:Association of toll-like receptor 2 polymorphisms with somatic cell score in Xinjiang Brown cattle.
    Journal:Animal science journal , 2012, 83 (1): 23-30
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:E+978
    User inputs on reference #22250735
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  • Cite this Data:

    Animal QTLdb: QTL20609 was published in 2012, and was curated into QTLdb on 2013-04-26. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:20609

     

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