| QTL Map Information |
|---|
| Chromosome: | 2 |
| QTL Peak Location: | 29.31 (cM) |
| QTL Span: | 29.30-29.32 (cM)
32.2-32.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs43303035 |
| Peak: | |
| Lower, "Significant": | rs136277435 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
 |
P_values | 5.62-7 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were US Gelbvieh cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped for a set of 856,527 imputed SNPs and analyzed for growth traits. |
| Analysis: | GWAS was performed using univariate linear mixed models. |
| Software: | PLINK, IMPUTE2, GEMMA, EMMAX |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Smith JL, Wilson ML, Nilson SM, Rowan TN, Oldeschulte DL, Schnabel RD, Decker JE, Seabury CM |
| Affiliation: | Department of Veterinary Pathobiology, Texas A&M University, College Station, 77843, USA |
| Title: | Genome-wide association and genotype by environment interactions for growth traits in U.S. Gelbvieh cattle |
| Journal: | BMC genomics, 2020, 20(1): 926 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | Genotype-by-environment interaction; GEMMA |
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