| QTL Map Information |
|---|
| Chromosome: | 18 |
| QTL Peak Location: | 64.98 (cM) |
| QTL Span: | 60.93-69.93 (cM)
47.5-54.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | BB710 |
| Peak: | |
| Lower, "Significant": | rs41884977 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 0.027 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
NCBI GeneDB | Edit |
Map view
|
| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were German Holstein cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped for 28 markers on BTA18 and analyzed for somatic cell score. |
| Analysis: | Combined linkage and linkage disequilibrium analysis was performed. A mixed model was used for association analysis. |
| Software: | CRIMAP, TIGER, ASReml, SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Brand B, Baes C, Mayer M, Reinsch N, Kuhn C |
| Affiliation: | Research Unit Molecular Biology, Research Institute for the Biology of Farm Animals, 18196 Dummerstorf, Germany |
| Title: | Identification of a two-marker-haplotype on Bos taurus autosome 18 associated with somatic cell score in German Holstein cattle. |
| Journal: | BMC genetics, 2009, 10:50 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | SNP rs41884977 located at 68.0 cM on MARC map; DYD |
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