| QTL Map Information |
|---|
| Chromosome: | 6 |
| QTL Peak Location: | 96.15 (cM) |
| QTL Span: | 96.15-96.15 (cM)
87.1-87.1 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs110987026 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 4.2E-7 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein bulls. |
| Breeds associated:
|
| Design: | Animals were genotyped using the BovineHD BeadChip, with data imputed to whole-genome level, and analyzed for health traits using deregressed PTA values. A total of 3,148,506 SNPs were used for analysis. |
| Analysis: | GWAS was performed using a mixed model association test. Fine-mapping was carried out using a Bayesian approach. |
| Software: | MMAP, BFMAP |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Freebern E, Santos DJA, Fang L, Jiang J, Parker Gaddis KL, Liu GE, VanRaden PM, Maltecca C, Cole JB, Ma L |
| Affiliation: | Department of Animal and Avian Sciences, University of Maryland, College Park, MD, 20742, USA |
| Title: | GWAS and fine-mapping of livability and six disease traits in Holstein cattle |
| Journal: | BMC genomics, 2020, 21(1): 41 |
| Links: |
PubMed | Abstract | List all data
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