| QTL Map Information |
|---|
| Chromosome: | 12 |
| QTL Peak Location: | 30.67 (cM) |
| QTL Span: | 30.67-30.67 (cM)
23.4-23.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs208265955 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | FREM2 (FRAS1 related extracellular matrix 2) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Hanwoo beef cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip, with data imputed to whole genome sequence, and analyzed for meat quality traits. A total of 15,536,497 SNPs were used for analysis. |
| Analysis: | Mixed linear models were used for association analysis. |
| Software: | Minimac 3, Eagle v2.3.2, GCTA, ASReml v4.1 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Bedhane M, van der Werf J, Gondro C, Duijvesteijn N, Lim D, Park B, Park MN, Hee RS, Clark S |
| Affiliation: | School of Environmental and Rural Science, University of New England, Armidale, Australia |
| Title: | Genome-Wide Association Study of Meat Quality Traits in Hanwoo Beef Cattle Using Imputed Whole-Genome Sequence Data |
| Journal: | Frontiers in genetics, 2019, 10: 1235 |
| Links: |
PubMed | Abstract | List all data
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