| QTL Map Information |
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| Chromosome: | 5 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs43436480 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | eQTL |
| Model tested: | n/a |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
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P_values | 1.61E-3 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | IL2RB (interleukin 2 receptor subunit beta) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| QTL Experiment in Brief |
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| Animals: | Animals were Holstein, Jersey, and Holstein x Jersey dairy cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the GeneSeek Genomic Profiler LDv3 or LDv4 chips and analyzed for milk yield and composition traits. For a region of interest on chromosome 5, genotypes were imputed to whole-genome sequence, and a total of 11,146 variants were used for analysis. |
| Analysis: | Mixed linear models were used for association analysis. |
| Software: | ASReml, GCTA, Beagle |
| Notes: | |
| Links: | Edit |
| Reference |
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| Authors: | Lopdell TJ, Tiplady K, Couldrey C, Johnson TJJ, Keehan M, Davis SR, Harris BL, Spelman RJ, Snell RG, Littlejohn MD |
| Affiliation: | Research and Development, Livestock Improvement Corporation, Ruakura Road, Hamilton, New Zealand |
| Title: | Multiple QTL underlie milk phenotypes at the CSF2RB locus |
| Journal: | Genetics, Selection, Evolution : GSE, 2019, 51(1): 3 |
| Links: |
PubMed | Abstract | List all data
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