| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | n/a |
| QTL Span: | n/a
|
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs109254133 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | eQTL |
| Model tested: | n/a |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | SLC37A1 (solute carrier family 37 member 1) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for milk production and composition traits. A total of 632,003 SNPs were used for analysis. |
| Analysis: | A BayesR procedure was used. |
| Software: | Beagle v3, ASReml, EMMAX, Minimac2, PLINK |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Kemper K E, Littlejohn M D, Lopdell T, Hayes B J, Bennett L E, Williams R P, Xu X Q, Visscher P M, Carrick M J, Goddard M E |
| Affiliation: | AgriBio, Centre for AgriBioscience, Department of Economic Development, Jobs, Transport and Resources, Bundoora, Victoria, Australia |
| Title: | Leveraging genetically simple traits to identify small-effect variants for complex phenotypes |
| Journal: | BMC genomics, 2016, 17(1): 858 |
| Links: |
PubMed | Abstract | List all data
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