| QTL Map Information |
|---|
| Chromosome: | 16 |
| QTL Peak Location: | 29.88 (cM) |
| QTL Span: | 29.88-29.88 (cM)
23.5-23.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs136394249 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | EPRS1 (glutamyl-prolyl-tRNA synthetase 1) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #180622
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Xinjiang Brown cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina Bovine 150K BeadChip and analyzed for milk, reproduction, and mastitis traits. A total of 139,376 SNPs were used for analysis. |
| Analysis: | The fixed and random model circulating probability unification (FarmCPU) method was used for GWAS. |
| Software: | DMU |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Zhou J, Liu L, Chen CJ, Zhang M, Lu X, Zhang Z, Huang X, Shi Y |
| Affiliation: | School of Agriculture, Ningxia University, Yinchuan, China |
| Title: | Genome-wide association study of milk and reproductive traits in dual-purpose Xinjiang Brown cattle |
| Journal: | BMC genomics, 2019, 20(1): 827 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #31703627
Add your comments
Note similar findings
Note contradictions
|
