| QTL Map Information |
|---|
| Chromosome: | 15 |
| QTL Peak Location: | 30.65 (cM) |
| QTL Span: | 30.65-30.65 (cM)
22.6-22.6 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs474553226 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 0.01 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | BCO2 (beta-carotene oxygenase 2) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #179336
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Holstein cross, Jersey cross, Sahiwal, Tharparkar, and Gir cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped for SNPs in the BCMO1, BCO2, and SCARB1 genes and analyzed for milk beta-carotene content. |
| Analysis: | ANOVA was performed using linear models. Bayesian analysis was also performed. |
| Software: | SAS, Haploview, FImpute 2.2 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Bertolini F, Chinchilla-Vargas J, Khadse J R, Juneja A, Deshpande P D, Kakramjar P M, Karlekar A R, Pande A B, Fernando Rohan L, Rothschild M F |
| Affiliation: | Department of Animal Science, Iowa State University, 2255 Kildee Hall, 806 Stange Road, Ames 50011 |
| Title: | Marker discovery and associations with beta-carotene content in Indian dairy cattle and buffalo breeds |
| Journal: | Journal of dairy science, 2019, 102(11):10039-10055 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #31477308
Add your comments
Note similar findings
Note contradictions
|
