| QTL Map Information |
|---|
| Chromosome: | 29 |
| QTL Peak Location: | 60.26 (cM) |
| QTL Span: | 60.26-60.26 (cM)
43.4-43.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs17872093 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
F_Stat | 9.57 | | VARIANCE | 0.59% | | P_values | 0.002 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | CAPN1 (calpain 1, (mu/I) large subunit) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Korean Hanwoo cattle. |
| Breeds associated:
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| Design: | Animals were genotyped for SNPs in the CAPN and CAST genes and analyzed for shear force in Longissimus thoracis and Semimembranosus. |
| Analysis: | A linear mixed regression model was used. |
| Software: | ASReml |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Lee HJ, Jin S, Kim HJ, Bhuiyan MSA, Lee DH, Lee SH, Jang SB, Han MH, Lee SH |
| Affiliation: | Division of Animal and Dairy Science, Chungnam National University, Daejeon 305-764, Korea |
| Title: | Validation Study of SNPs in CAPN1-CAST Genes on the Tenderness of Muscles (Longissimus thoracis and Semimembranosus) in Hanwoo (Korean Cattle) |
| Journal: | Animals : an open access journal from MDPI, 2019, 9(9) |
| Links: |
PubMed | Abstract | List all data
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| Additional Information |
|---|
| Comments: | Longissimus thoracis |
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