| QTL Map Information |
|---|
| Chromosome: | 1 |
| QTL Peak Location: | 138.12 (cM) |
| QTL Span: | 137.18-139.07 (cM)
142.8-144.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs109767444 |
| Peak: | |
| Lower, "Significant": | rs42343653 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
VARIANCE | 1.37% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Brazilian Holstein cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using either the Illumina Bovine LD BeadChip or the GeneSeek Genomic Profiler Bovine 50k, with all data imputed to 60,671 SNPs, and analyzed for milk composition traits. A total of 56,256 SNPs were used for analysis. |
| Analysis: | The weighted single-step genomic BLUP method was used to perform association analysis. |
| Software: | finshap.f90, BLUPF90 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Iung LHS, Petrini J, Ramírez-Díaz J, Salvian M, Rovadoscki GA, Pilonetto F, Dauria BD, Machado PF, Coutinho LL, Wiggans GR, Mourão GB |
| Affiliation: | Department of Animal Science, University of São Paulo (USP)/Luiz de Queiroz College of Agriculture (ESALQ), Piracicaba, São Paulo 13418900, Brazil |
| Title: | Genome-wide association study for milk production traits in a Brazilian Holstein population |
| Journal: | Journal of dairy science, 2019, 102(6):5305-5314 |
| Links: |
PubMed | Abstract | List all data
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