| QTL Map Information |
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| Chromosome: | 26 |
| QTL Peak Location: | 30.55 (cM) |
| QTL Span: | 30.55-30.55 (cM)
21.3-21.3 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs41255691 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Comparison-wise |
| Threshold significance level: | Significant |
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P_values | 2.62E-7 | | Dominance effect: | n/a |
| Additive effect: | -0.115 |
| Associated Gene: | SCD (stearoyl-CoA desaturase (delta-9-desaturase)) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
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| Animals: | Animals were Chinese Wagyu cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina BovineHD BeadChip and analyzed for meat fatty acid composition traits. A total of 503,579 autosomal SNPs were used for analysis. |
| Analysis: | The fixed and random model circulating probability unification (FarmCPU) model was used to test single-SNP association. |
| Software: | GAPIT, PLINK, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Wang Z, Zhu B, Niu H, Zhang W, Xu L, Xu L, Chen Y, Zhang L, Gao X, Gao H, Zhang S, Xu L, Li J |
| Affiliation: | 1Innovation Team of Cattle Genetic Breeding, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100193 China |
| Title: | Genome wide association study identifies SNPs associated with fatty acid composition in Chinese Wagyu cattle |
| Journal: | Journal of animal science and biotechnology, 2019, 10: 27 |
| Links: |
PubMed | Abstract | List all data
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