| QTL Map Information |
|---|
| Chromosome: | 18 |
| QTL Peak Location: | 60.79 (cM) |
| QTL Span: | 60.79-60.79 (cM)
46.4-46.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs109623069 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Nordic Holstein cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip v1 or v2, with data imputed to HD then to WGS, and analyzed for milk composition. |
| Analysis: | Conditional GWAS was performed in which lead SNPs were fitted as covariates in subsequent rounds. |
| Software: | Beagle, IMPUTE2 v2.3.1, Minimac2, GCTA |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Cai Z, Guldbrandtsen B, Lund MS, Sahana G |
| Affiliation: | Center for Quantitative Genetics and Genomics, Department of Molecular Biology and Genetics, Aarhus University, 8830, Tjele, Denmark |
| Title: | Dissecting closely linked association signals in combination with the mammalian phenotype database can identify candidate genes in dairy cattle |
| Journal: | BMC genetics, 2019, 20(1): 15 |
| Links: |
PubMed | Abstract | List all data
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