| QTL Map Information |
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| Chromosome: | 5 |
| QTL Peak Location: | 109.98 (cM) |
| QTL Span: | 109.98-109.98 (cM)
99.8-99.8 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs110353594 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
P_values | 0.0007 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | CLEC7A (C-type lectin domain family 7, member A) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Indian cattle of various breeds: Holstein Friesian, Sahiwal, Tharparkar, and Vrindavani (Holstein-Friesian/Brown Swiss/Jersey/Hariana) crossbred. |
| Breeds associated:
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| Design: | Animals were genotyped for six SNPs in the CLEC7A gene and analyzed for paratuberculosis incidence. |
| Analysis: | Univariate analysis was performed for categorical variables with a Chi-square test on the distribution of allele and genotype frequencies between cases and controls. |
| Software: | SAS |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Kumar S, Kumar S, Singh RV, Chauhan A, Kumar A, Bharati J, Singh SV |
| Affiliation: | Animal Health Division, ICAR- CIRG, Makhdoom-281112, U.P., India |
| Title: | Association of Bovine CLEC7A gene polymorphism with host susceptibility to paratuberculosis disease in Indian cattle |
| Journal: | Research in veterinary science, 2019, 123: 216-222 |
| Links: |
PubMed | Abstract | List all data
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