| QTL Map Information |
|---|
| Chromosome: | 4 |
| QTL Peak Location: | 4.95 (cM) |
| QTL Span: | 4.95-4.95 (cM)
5.2-5.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs110504747 |
| Peak: | |
| Lower, "Significant": | rs109462665 |
| Lower, "Suggestive": | n/a |
| Marker type: | CNV |
| Analysis type: | QTL |
| Model tested: | n/a |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
FDR | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #167130
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Chinese Simmental cattle. |
| Breeds associated:
|
| Design: | CNVR were identified and analyzed for association with average daily gain. Animals were genotyped using the Illumina BovineHD BeadChip and 61,710 CNV events were used for analysis. |
| Analysis: | The association between CNV carrier frequencies and ADG was evaluated using linear mixed models. |
| Software: | PennCNV v1.0.4, ParseCNV, EMMAX |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Xu L, Yang L, Wang L, Zhu B, Chen Y, Gao H, Gao X, Zhang L, Liu GE, Li J |
| Affiliation: | Innovation Team of Cattle Genetic Breeding, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100193, China |
| Title: | Probe-based association analysis identifies several deletions associated with average daily gain in beef cattle |
| Journal: | BMC genomics, 2019, 20(1): 31 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #30630414
Add your comments
Note similar findings
Note contradictions
|
