| QTL Map Information |
|---|
| Chromosome: | 12 |
| QTL Peak Location: | 49.03 (cM) |
| QTL Span: | 49.03-49.03 (cM)
37.3-37.3 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs135634507 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
FDR | 7.21E-03 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were Chinese Simmental cattle. |
| Breeds associated:
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| Design: | CNVR were identified and analyzed for association with average daily gain. Animals were genotyped using the Illumina BovineHD BeadChip and 61,710 CNV events were used for analysis. |
| Analysis: | The association between CNV carrier frequencies and ADG was evaluated using linear mixed models. |
| Software: | PennCNV v1.0.4, ParseCNV, EMMAX |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Xu L, Yang L, Wang L, Zhu B, Chen Y, Gao H, Gao X, Zhang L, Liu GE, Li J |
| Affiliation: | Innovation Team of Cattle Genetic Breeding, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100193, China |
| Title: | Probe-based association analysis identifies several deletions associated with average daily gain in beef cattle |
| Journal: | BMC genomics, 2019, 20(1): 31 |
| Links: |
PubMed | Abstract | List all data
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