| QTL Map Information |
|---|
| Chromosome: | 10 |
| QTL Peak Location: | 50.06 (cM) |
| QTL Span: | 49.65-50.48 (cM)
44.7-45.4 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | rs41568927 |
| Peak: | |
| Lower, "Significant": | rs43625619 |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | QTL |
| Model tested: | Mendelian |
| Test base: | n/a |
| Threshold significance level: | Significant |
 |
VARIANCE | 1.227% | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #166733
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were first-lactation Holstein dairy cows in Canada. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina Bovine SNP50 BeadChip and analyzed for reproductive disorder incidence. A total of 40,852 SNPs were used for analysis. |
| Analysis: | A weighted ssGWAS approach with a multiple-trait linear model was employed. |
| Software: | FImpute, GIBBSF290 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Guarini A R, Lourenco D A L, Brito L F, Sargolzaei M, Baes C F, Miglior F, Misztal I, Schenkel F S |
| Affiliation: | Centre for Genetic Improvement of Livestock, Department of Animal Biosciences, University of Guelph, Guelph, ON, Canada N1G 2W1 |
| Title: | Genetics and genomics of reproductive disorders in Canadian Holstein cattle |
| Journal: | Journal of dairy science, 2019, 102(2):1341-1353 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #30471913
Add your comments
Note similar findings
Note contradictions
|
