| QTL Map Information |
|---|
| Chromosome: | 19 |
| QTL Peak Location: | 91.31 (cM) |
| QTL Span: | 91.31-91.31 (cM)
50.7-50.7 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs41636874 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | CCDC57 (coiled-coil domain containing 57) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #164025
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Korean Hanwoo cattle. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSNP50 BeadChip (with data imputed to HD) or BovineHD BeadChip and analyzed for beef fatty acid composition. A total of 633,029 SNPs were used for analysis. |
| Analysis: | Linear mixed models were used. |
| Software: | PLINK, Beagle, ASReml, GCTA, R software, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Bhuiyan MSA, Kim YK, Kim HJ, Lee DH, Lee SH, Yoon HB, Lee SH |
| Affiliation: | Division of Animal & Dairy Science, Chungnam National University, Dajeon, South Korea |
| Title: | Genome-wide association study and prediction of genomic breeding values for fatty-acid composition in Korean Hanwoo cattle using a high-density single-nucleotide polymorphism array |
| Journal: | Journal of animal science, 2018, 96(10): 4063-4075 |
| Links: |
PubMed | Abstract | List all data
| Edit |
User inputs on reference #30265318
Add your comments
Note similar findings
Note contradictions
|
