| QTL Map Information |
|---|
| Chromosome: | 14 |
| QTL Peak Location: | 0.69 (cM) |
| QTL Span: | 0.69-0.69 (cM)
0.5-0.5 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs17870736 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | VPS28 (VPS28, ESCRT-I subunit) |
| Cis/Trans acting type: |  |
| Links:
Edit |
Map view
|
| Extended information: |
|---|
| (none) |
User inputs on QTL #161573
Add your annotations
Add your comments
Report problems
|
| QTL Experiment in Brief |
|---|
| Animals: | Animals were Canadian Holstein cows. |
| Breeds associated:
|
| Design: | Animals were genotyped using the Illumina BovineSP50 BeadChip and analyzed for milk cholesterol content. A total of 40,196 SNPs were used for analysis. |
| Analysis: | Univariate single-SNP mixed linear models were used. |
| Software: | DMU, Haploview |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Do DN, Schenkel FS, Miglior F, Zhao X, Ibeagha-Awemu EM |
| Affiliation: | Agriculture and Agri-Food Canada, Sherbrooke Research and Development Centre, Sherbrooke, QC, J1M 0C8, Canada |
| Title: | Genome wide association study identifies novel potential candidate genes for bovine milk cholesterol content |
| Journal: | Scientific reports, 2018, 8(1): 13239 |
| Links: |
PubMed | Abstract | List all data
| Edit |
| Additional Information |
|---|
| Comments: | mg/100g milk |
User inputs on reference #30185830
Add your comments
Note similar findings
Note contradictions
|
