Release 56
(Apr 24, 2025)

QTL 161549 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: (n/a) Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:6
QTL Peak Location:16.82 (cM)
QTL Span:16.82-16.82 (cM)
15.2-15.2 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs381515962
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values0.027
Dominance effect:n/a
Additive effect:n/a
Associated Gene:ELOVL6 (ELOVL fatty acid elongase 6)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Chinese Holstein cows.
     Breeds associated:
    Design:Animals were genotyped for three SNPs in the ELOVL6 gene and analyzed for milk quality traits.
    Analysis:ANOVA and the general linear model were used.
    Software:POPGENE, TFPGA, Shesis, SPSS
    Notes: 
    Links:Edit

     Reference
    Authors:Chen S, Chai M, Tian C, Li Y, Deng T, Wu H, Liu X
    Affiliation:Shaanxi Key Laboratory of Molecular Biology for Agriculture, College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, China
    Title:Genetic variants of fatty acid elongase 6 in Chinese Holstein cow
    Journal:Gene, 2018, 670: 123-129
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #29787827
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  • Cite this Data:

    Animal QTLdb: QTL161549 was published in 2018, and was curated into QTLdb on 2018-10-10. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:161549

     

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