| QTL Map Information |
|---|
| Chromosome: | 9 |
| QTL Peak Location: | 69.27 (cM) |
| QTL Span: | 69.27-69.27 (cM)
64.2-64.2 (Mbp) |
 |
Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs42715661 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Experiment-wise |
| Threshold significance level: | Significant |
 |
P_values | 0.012 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | n/a |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
|---|
| (none) |
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| QTL Experiment in Brief |
|---|
| Animals: | Animals were first-lactation Holstein cows. |
| Breeds associated:
|
| Design: | Animals were genotyped using either the Illumina Bovine 50K SNP BeadChip or the 10K Illumina Bovine Eurogenomics SNP chip, with data imputed to 50K, and analyzed for disease incidence. A total of 43,939 SNPs were used for analysis. |
| Analysis: | A linear mixed model was used. |
| Software: | GCTA, RANGER in R |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Naderi S, Bohlouli M, Yin T, König S |
| Affiliation: | Institute of Animal Breeding and Genetics, University of Gießen, Ludwigstr. 21b, 35390, Gießen, Germany |
| Title: | Genomic breeding values, SNP effects and gene identification for disease traits in cow training sets |
| Journal: | Animal genetics, 2018, 49(3): 178-192 |
| Links: |
PubMed | Abstract | List all data
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