| QTL Map Information |
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| Chromosome: | 14 |
| QTL Peak Location: | 81.34 (cM) |
| QTL Span: | 81.34-81.34 (cM)
60.6-60.6 (Mbp) |
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Upper, "Suggestive": | n/a |
| Upper, "Significant": | n/a |
| Peak: | rs133709207 |
| Lower, "Significant": | n/a |
| Lower, "Suggestive": | n/a |
| Marker type: | SNP |
| Analysis type: | Association |
| Model tested: | Mendelian |
| Test base: | Genome-wise |
| Threshold significance level: | Significant |
 |
P_values | <0.05 | | Dominance effect: | n/a |
| Additive effect: | n/a |
| Associated Gene: | RIMS2 (regulating synaptic membrane exocytosis 2) |
| Cis/Trans acting type: |  |
| Links:
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| Extended information: |
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| (none) |
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| QTL Experiment in Brief |
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| Animals: | Animals were Chinese Simmental cattle. |
| Breeds associated:
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| Design: | Animals were genotyped using the Illumina Bovine HD BeadChip and analyzed for carcass weight and bone weight. A total of 671,990 SNPs were used for analysis. |
| Analysis: | Three statistical models were used for GWAS: a fixed polygene model, a random polygene model, and a random polygene model using a composite interval mapping strategy. |
| Software: | R3.3.1 |
| Notes: | |
| Links: | Edit |
| Reference |
|---|
| Authors: | Chang T, Xia J, Xu L, Wang X, Zhu B, Zhang L, Gao X, Chen Y, Li J, Gao H |
| Affiliation: | Laboratory of Molecular Biology and Bovine Breeding, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, 100193, China |
| Title: | A genome-wide association study suggests several novel candidate genes for carcass traits in Chinese Simmental beef cattle |
| Journal: | Animal genetics, 2018, 49(4): 312-316 |
| Links: |
PubMed | Abstract | List all data
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