Release 56
(Apr 24, 2025)

QTL 16056 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: Somatic cell score Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:28
QTL Peak Location:52.32 (cM)
QTL Span:52.32-52.32 (cM)
35.6-35.6 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs109492835
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:MBL1 (mannose binding lectin, liver (A))
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Chinese Holstein cattle.
     Breeds associated:
    Design:Animals were genotyped for three SNPs in MBL1 and analyzed for milk traits.
    Analysis:A least-square model was used.
    Software:TFPGA, SHEsis
    Notes: 
    Links:Edit

     Reference
    Authors:Wang C, Liu M, Li Q, Ju Z, Huang J, Li J, Wang H, Zhong J
    Affiliation:Laboratory of Dairy Cattle Reproduction, Dairy Cattle Research Center, Shandong Academy of Agricultural Science, 159 Industry North Road, Jinan, Shandong 250100, PR China
    Title:Three novel single-nucleotide polymorphisms of MBL1 gene in Chinese native cattle and their associations with milk performance traits
    Journal:Veterinary immunology and immunopathology, 2011, 139(2-4):229-36
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #21106253
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  • Cite this Data:

    Animal QTLdb: QTL16056 was published in 2011, and was curated into QTLdb on 2012-03-07. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:16056

     

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