Release 56
(Apr 24, 2025)

QTL 15943 Description:

 Trait Information
Trait name: Somatic cell score Vertebrate Trait Ontology: Milk somatic cell quantity
Reported name: Somatic cell score Product Trait Ontology: Milk somatic cell count
Symbol: SCS Clinical Measurement Ontology: Milk somatic cell score
 QTL Map Information
Chromosome:6
QTL Peak Location:40 (cM)
QTL Span:10.83-11.03 (cM)
9.5-9.7 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.05
Dominance effect:n/a
Additive effect:n/a
Associated Gene:ABCG2 (ATP-binding cassette, sub-family G (WHITE), member 2)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

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  •  QTL Experiment in Brief
    Animals:Animals were Chinese Holstein cattle.
     Breeds associated:
    Design:Animals were genotyped for two polymorphisms in ABCG2 and analyzed for milk traits.
    Analysis:A least-squares method was used.
    Software:SPSS
    Notes: 
    Links:Edit

     Reference
    Authors:Yue W, Fang X, Zhang C, Pang Y, Xu H, Gu C, Shao R, Lei C, Chen H
    Affiliation:Institute of Cellular and Molecular Biology, College of Life Science, Xuzhou Normal University, 221116 Xuzhou, Jiangsu, People's Republic of China
    Title:Two novel SNPs of the ABCG2 gene and its associations with milk traits in Chinese Holsteins.
    Journal:Molecular biology reports, 2011, 38(5): 2927-32
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:First lactation
    User inputs on reference #20140710
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  • Cite this Data:

    Animal QTLdb: QTL15943 was published in 2011, and was curated into QTLdb on 2012-02-21. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:15943

     

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