Release 56
(Apr 24, 2025)

QTL 15935 Description:

 Trait Information
Trait name: Sperm counts Vertebrate Trait Ontology: Sperm quantity
Reported name: sperm counts Product Trait Ontology: n/a
Symbol: SEMENQ Clinical Measurement Ontology: Sperm count
 QTL Map Information
Chromosome:27
QTL Peak Location:9.09 (cM)
QTL Span:9.09-9.09 (cM)
6.1-6.1 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:rs109340837
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:SNP
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.01
Dominance effect:n/a
Additive effect:n/a
Associated Gene:SPAG11B (sperm associated antigen 11B)
Cis/Trans acting type:
Links:   NCBI GeneDB  |  Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #15935
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Chinese Holstein bulls.
     Breeds associated:
    Design:Animals were genotyped for six SNPs in SPAG11 and analyzed for sperm quality traits.
    Analysis:A least-squares method was used.
    Software:SHEsis, TFPGA, SAS
    Notes: 
    Links:Edit

     Reference
    Authors:Liu X, Ju Z, Wang L, Zhang Y, Huang J, Li Q, Li J, Zhong J, An L, Wang C
    Affiliation:Laboratory of Dairy Cattle Reproduction, Dairy Cattle Research Center, Shandong Academy of Agricultural Science, Jinan, PR China
    Title:Six novel single-nucleotide polymorphisms in SPAG11 gene and their association with sperm quality traits in Chinese Holstein bulls
    Journal:Anim Reprod Sci, 2011, 129(1-2):14-21
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  
    User inputs on reference #22030336
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL15935 was published in 2011, and was curated into QTLdb on 2012-02-21. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:15935

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team