Release 56
(Apr 24, 2025)

QTL 15929 Description:

 Trait Information
Trait name: Meat color Vertebrate Trait Ontology: n/a
Trait details: yellow intensity (b*), 14 days post-mortem Product Trait Ontology: Meat color
Symbol: MCOL Clinical Measurement Ontology: n/a
 QTL Map Information
Chromosome:29
QTL Peak Location:56 (cM)
QTL Span:48.03-48.23 (cM)
35.2-35.3 (Mbp)
Upper, "Suggestive":n/a
Upper, "Significant":n/a
Peak:
Lower, "Significant":n/a
Lower, "Suggestive":n/a
Marker type:-
Analysis type:Association
Model tested:Mendelian
Test base:n/a
Threshold significance level:Significant
P_values<0.04
Dominance effect:-0.537
Additive effect:0.3842
Associated Gene:CAPN1 (calpain 1, (mu/I) large subunit)
Cis/Trans acting type:
Links:   Edit  |   Map view

 Extended information:
(none)

User inputs on QTL #15929
  • Add your annotations
  • Add your comments
  • Report problems
  •  QTL Experiment in Brief
    Animals:Animals were Nellore cattle.
     Breeds associated:
    Design:Animals were genotyped for one SNP each in CAPN1, leptin receptor, leptin, and GHR genes and analyzed for meat quality traits.
    Analysis:A likelihood ratio test was conducted between the reduced models.
    Software:QXPAK
    Notes: 
    Links:Edit

     Reference
    Authors:Pinto LF, Ferraz JB, Pedrosa VB, Eler JP, Meirelles FV, Bonin MN, Rezende FM, Carvalho ME, Cucco DC, Silva RC
    Affiliation:Departamento de Produção Animal, Escola de Medicina Veterinária e Zootecnia, Universidade Federal da Bahia, Salvador, BA, Brasil
    Title:Single nucleotide polymorphisms in CAPN and leptin genes associated with meat color and tenderness in Nellore cattle
    Journal:Genet Mol Res, 2011, 10(3):2057-64
    Links:  PubMed  |  Abstract   |  List all data   |  Edit  

     Additional Information
    Comments:CAPN4751
    User inputs on reference #21968622
  • Add your comments
  • Note similar findings
  • Note contradictions
  • Cite this Data:

    Animal QTLdb: QTL15929 was published in 2011, and was curated into QTLdb on 2012-02-21. DBxREF link to this data: https://www.animalgenome.org/QTLdb/q?id=QTL_ID:15929

     

    © 2003-2025: USA · USDA · NRPSP8 · Program to Accelerate Animal Genomics Applications. Contact: Bioinformatics Team